openfold.data.tools.parse_msa_files

Functions

main()
parse_a3m_file(alignment_dir, a3m_file)
parse_stockholm_file(alignment_dir, ...)
run_parse_all_msa_files_multiprocessing(...)

main()

parse_a3m_file(alignment_dir, a3m_file)

Parameters:

• alignment_dir (str)

• a3m_file (str)

parse_stockholm_file(alignment_dir, stockholm_file)

Parameters:

• alignment_dir (str)

• stockholm_file (str)

run_parse_all_msa_files_multiprocessing(stockholm_files, a3m_files, alignment_dir)

Parameters:

• stockholm_files (list)

• a3m_files (list)

• alignment_dir (str)